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Maize single cell sequencing

WebMay 5, 2004 · A large amount of repetitive DNA complicates the assembly of the maize genome sequence. Genome-filtration techniques, such as methylation-filtration and high … WebApr 12, 2024 · By using single-cell transcriptomic data and refined phylostratigraphy, the team determines the transcriptomic age of individual cells, which means they are able to estimate the evolutionary origin of different cells based on the age of the genes expressed in the cells. Their findings shed light on the cellular basis of the ‘hourglass ...

Single-cell RNA sequencing reveals the landscape of …

WebDec 3, 2024 · Here, we used single-cell RNA sequencing to rapidly generate a cell-resolution map of the maize root, revealing an alternative configuration of the tissue formative transcription factor SHORT-ROOT (SHR) adjacent to an expanded cortex. We show that maize SHR protein is hypermobile, moving at least eight cell layers into the … WebDec 14, 2024 · Single-Cell Transcriptomic Approach for the Analysis of Maize Vegetative SAM Cells. Single-cell transcriptomic analyses of plant cells require the preparation of … meaning of name shivani https://patricksim.net

Agronomy Free Full-Text CT-Based Phenotyping and Genome …

WebMar 2, 2024 · Maize single cell sequencing dataset 2: Sample type: SRA : Source name: maize (B73) leaf 2: Organism: Zea mays: Characteristics: genotype: B73 inbred line tissue: V2 seedling leaf 2, distal 6cm: Treatment protocol: Protoplasts for scRNA-seq were generated from the last 6 cm of the distal portion of V2 leaf 2. For each pool of … WebFeb 15, 2024 · A cell atlas of maize peels and leaf bases created by single-nucleus RNA sequencing provides insights into the molecular basis of stomatal movement and developm. ... We have developed a planta platform of single-nucleus RNA-sequencing by combined fluorescence-activated nuclei flow sorting, and used it to identify cell types in … WebDec 15, 2024 · In maize, single-cell sequencing profiling helped identify cells with unique characteristics on the adaxial side, enhancing the possibility of bioengineering the plant (Bezrutczyk et al., 2024). As single-cell transcriptomics is increasingly applied to several plant species, future research will indeed introduce it to crop species. meaning of name shubhangi

Lack of ethnic diversity in single-cell transcriptomics hinders cell ...

Category:The evolution of single-cell RNA sequencing technology and …

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Maize single cell sequencing

Single-cell transcriptome atlas and chromatin …

WebDec 1, 2024 · Single-cell RNA sequencing reveals the landscape of maize root tips and assists in identification of cell type-specific nitrate-response genes 1. Introduction. … WebApr 12, 2024 · Single-cell sequencing would allow you to examine and identify the components of each fruit (strawberries, oranges, kiwis, grapes). This gives a very clear …

Maize single cell sequencing

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WebApr 5, 2024 · Using single-cell RNA sequencing, we reconstructed the developmental program into maize male meiosis. A smooth continuum of expression stages before … WebMay 10, 2024 · The project, led by Alexandre Marand, isolated thousands of individual cells to determine the regulatory DNA—the parts of DNA that control the genes that are …

WebThe allele-specific polymerase chain reaction (ASPCR) has been used to determine the genotype of maize lines at two loci, wx and NPI288. The ASPCR method uses allele … WebJan 4, 2024 · Request PDF Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery Crop productivity depends on activity of meristems that ...

WebMar 2, 2024 · Maize single cell sequencing dataset 1: Sample type: SRA : Source name: maize (B73) leaf 2: Organism: Zea mays: Characteristics: genotype: B73 inbred line tissue: V2 seedling leaf 2, distal 6cm: Treatment protocol: Protoplasts for scRNA-seq were generated from the last 6 cm of the distal portion of V2 leaf 2. For each pool of …

WebFeb 22, 2024 · Isolation of maize ear protoplasts to construct a single-cell transcriptomic atlas (A) Experimental design, the first panel shows a scanning electron microscope …

WebJan 13, 2024 · A single-cell-resolution map of the maize root meristem, consisting of 14,775 high-quality sequenced cells, identified 21 cell clusters, which were then spatially mapped back to the... meaning of name shuaWebMar 1, 2024 · The root system is fundamental for maize growth and yield. Characterizing its heterogeneity and cell type-specific response to nitrate at the single-cell level will shed light on root development ... ped wardWebUsing single-cell genomics in six maize organs, we determined the cis - and trans -regulatory factors defining diverse cell identities and coordinating chromatin organization … meaning of name silverWebSingle-cell sequencing approaches reveal the intracellular dynamics of individual cells and answer biological questions with high-dimensional catalogs of millions of cells, including … meaning of name simarWeb1 day ago · A high-throughput single-cell single-mitochondrial genome sequencing technology known as iMiGseq has provided new insights into mutations of mitochondrial … meaning of name sianWebXu et al. construct and validate a single-cell transcriptomic atlas of developing maize ears. Their single-cell gene co-expression networks will facilitate developmental genetics studies by predicting genetic redundancy and revealing transcriptional regulatory networks. meaning of name simeonWebApr 12, 2024 · Single-cell sequencing would allow you to examine and identify the components of each fruit (strawberries, oranges, kiwis, grapes). This gives a very clear picture of the genomes from each cell type and allows you to identify a potential gene, or target, that can only be found in the strawberries so that whatever therapy or drug you … meaning of name siraj